Whoah. I haven't been around here in awhile and I'm stoked that people are still interested
So anyway....
If you're running into troubles with the templates and relation names, check the corresponding place in the templates for relation.UtilizingPropertyName. If it's not that, it's a bug in the template. Which is entirely possible. These templates were written over the course of a week or two.
Altough I've been using them for every project since, there is no way we got all the bugs out of them.
If you fix a bug, please submit the patch to the subversion repo. If you don't have access, ask Otis.